Spatial preferences of microRNA targets in 3' untranslated regions

Supplementary information for the eponymous paper by Majoros and Ohler (2007)

Duke University, Institute for Genome Sciences and Policy

This site provides cross-linked access between the microRNA genes and their predicted target sites. Users can also access the UCSC browser, for which we have created custom tracks displaying our UTR annotation and predicted target sites.

Browse the predictions by gene ID
We provide LocusLink and Refseq IDs. Coordinates match human genome assembly 16. "7mer" refers to the complement of miRNA positions 2-8.
Browse the predictions by miRNA ID
miRNA IDs are from miRbase. For each target, the segment in which it is found is given (numbers for alternative segments start at 0).
Enter the custom UCSC browser tracks

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Web page created by Majoros and Ohler.
Last update: 04.15.07