Publications
Determinants of promoter and enhancer transcription directionality in metazoans.
Mahmoud Ibrahim, Aslihan Karabacak, Glahs, Alexander, Kolundzic, Ena, Antje Hirsekorn, Carda, Alexa, Tursun, Baris, Zinzen, Robert P, Scott Allen Lacadie, Uwe OhlerNature communications 2018;
DOI
PubMed
A Multi-step Transcriptional and Chromatin State Cascade Underlies Motor Neuron Programming from Embryonic Stem Cells
Velasco, Silvia, Mahmoud Ibrahim, Kakumanu, Akshay, Garipler, Gorkem, Aydin, Begum, Al-Sayegh, Mohamed Ahmed, Antje Hirsekorn, Abdul-Rahman, Farah, Satija, Rahul, Uwe Ohler, Mahony, Shaun, Mazzoni, Esteban OCell Stem Cell 2017;
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PubMed
Divergent Transcription and Epigenetic Directionality of Human Promoters
Scott Allen Lacadie, Mahmoud Ibrahim, Sucheta Arun Gokhale, Uwe OhlerFEBS J. 2016;
DOI
PubMed
JAMM: a peak finder for joint analysis of NGS replicates
Mahmoud Ibrahim, Scott Allen Lacadie, Uwe OhlerBioinformatics 2015;
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PubMed
Human Promoters Are Intrinsically Directional
Duttke, S. H., Scott Allen Lacadie, Mahmoud Ibrahim, Glass, C. K., Corcoran, D. L., Benner, C., Heinz, S., Kadonaga, J. T., Uwe OhlerMolecular Cell 2015;
DOI
PubMed
Perspectives on Unidirectional versus Divergent Transcription
Duttke, S. H., Scott Allen Lacadie, Mahmoud Ibrahim, Glass, C. K., Corcoran, D. L., Benner, C., Heinz, S., Kadonaga, J. T., Uwe OhlerMol. Cell 2015;
DOI
PubMed