Publications (2012)
High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
N. Breakfield, D. Corcoran, J. Petricka, J. Shen, J. Sae-Seaw, I. Rubio-Somoza, D. Weigel, Uwe Ohler, P. BenfeyGenome Res. 2012;



The viral and cellular microRNA targetome in lymphoblastoid cell lines
R. Skalsky, D. Corcoran, E. Gottwein, C. Frank, D. Kang, M. Hafner, J. Nusbaum, R. Feederle, H. Delecluse, M. Luftig, T. Tuschl, Uwe Ohler, B. CullenPLoS Pathog. 2012;



The protein expression landscape of the Arabidopsis root
J. Petricka, M. Schauer, M. Megraw, N. Breakfield, J. Thompson, S. Georgiev, E. Soderblom, Uwe Ohler, M. Moseley, U. Grossniklaus, P. BenfeyProc. Natl. Acad. Sci. U.S.A. 2012;



Genome-wide search for miRNA-target interactions in Arabidopsis thaliana with an integrated approach
J. Ding, D. Li, Uwe Ohler, J. Guan, S. ZhouBMC Genomics 2012;



Translocation of sickle cell erythrocyte microRNAs into Plasmodium falciparum inhibits parasite translation and contributes to malaria resistance
G. LaMonte, N. Philip, J. Reardon, J. Lacsina, W. Majoros, L. Chapman, C. Thornburg, M. Telen, Uwe Ohler, C. Nicchitta, T. Haystead, J. ChiCell Host Microbe 2012;



Predicting cell-type-specific gene expression from regions of open chromatin
A. Natarajan, Gurkan Yardimci, N. Sheffield, G. Crawford, Uwe OhlerGenome Res. 2012;



The Drosophila Translational Control Element (TCE) is required for high-level transcription of many genes that are specifically expressed in testes
R. Katzenberger, E. Rach, A. Anderson, Uwe Ohler, D. WassarmanPLoS ONE 2012;



A microfluidic device and computational platform for high-throughput live imaging of gene expression
W. Busch, B. Moore, B. Martsberger, D. Mace, R. Twigg, J. Jung, I. Pruteanu-Malinici, S. Kennedy, G. Fricke, R. Clark, Uwe Ohler, P. BenfeyNat. Methods 2012;



Chromatin accessibility reveals insights into androgen receptor activation and transcriptional specificity
A. Tewari, Gurkan Yardimci, Y. Shibata, N. Sheffield, L. Song, B. Taylor, S. Georgiev, G. Coetzee, Uwe Ohler, T. Furey, G. Crawford, P. FebboGenome Biol. 2012;



FMRP targets distinct mRNA sequence elements to regulate protein expression
M. Ascano, Neelanjan Mukherjee, P. Bandaru, J. Miller, J. Nusbaum, D. Corcoran, C. Langlois, M. Munschauer, S. Dewell, M. Hafner, Z. Williams, Uwe Ohler, T. TuschlNature 2012;


