Publications (2016)
Alternative Splicing Substantially Diversifies the Transcriptome during Early Photomorphogenesis and Correlates with the Energy Availability in Arabidopsis
Lisa Hartmann, Philipp Drewe-Boss, Theresa Wiessner, Gabriele Wagner, Sascha Geue, Hsin-Chieh Lee, Dominik Obermueller, Andre Kahles, Jonas Behr, Fabian Sinz, Gunnar Raetsch, Andreas WachterThe Plant Cell 2016;
DOI
PubMed
High-Resolution Expression Map of the Arabidopsis Root Reveals Alternative Splicing and lincRNA Regulation.
Song Li, Masashi Yamada, Xinwei Han, Uwe Ohler, Philip BenfeyDOI
PubMed
Super-resolution ribosome profiling reveals unannotated translation events in Arabidopsis
Polly Hsu, Lorenzo Calviello, Hsin-Yen Wu, Fay-Wei Li, Carl Rothfels, Uwe Ohler, Philip BenfeyDOI
PNAS
The mRNA-bound proteome of the early fly embryo
Hans-Hermann Wessels, K. Imami, A. Baltz, M. Kolinksi, M. Beldovskaya, M. Selbach, S. Small, Uwe Ohler, M. LandthalerGenome Res. 2016;
DOI
Identifying RBP Targets with RIP-seq
Hans-Hermann Wessels, Antje Hirsekorn, Uwe Ohler, Neelanjan MukherjeeMethods Mol. Biol. 2016;
DOI
PubMed
CSEQ-SIMULATOR: A DATA SIMULATOR FOR CLIP-SEQ EXPERIMENTS
Wanja Kassuhn, Uwe Ohler, P. DrewePac Symp Biocomput 2016;
PubMed
Divergent Transcription and Epigenetic Directionality of Human Promoters
Scott Allen Lacadie, Mahmoud Ibrahim, Sucheta Arun Gokhale, Uwe OhlerFEBS J. 2016;
DOI
PubMed
Detecting actively translated open reading frames in ribosome profiling data
Lorenzo Calviello, Neelanjan Mukherjee, Emanuel Wyler, Henrik Zauber, Antje Hirsekorn, Matthias Selbach, Markus Landthaler, Benedikt Obermayer, Uwe OhlerNature Methods 2016;
DOI
PubMed