Software
List of software from the Lab
This site largely contains legacy tools.
Note that recent code (2020-) can be found at our github repository.
Prediction of coding and non-coding genes:
Promoter and enhancer analysis:
TF target site identification:
ChIP/CLIP analysis:
Crosslinked-sequence (Cseq) Simulator
miRNA target prediction:
Ribosome profiling:
Regulatory network topology:
Gene expression imaging:
Analysis of RNA-binding proteins:
Identification of RNA editing events: